If it is an open tank style bulk ink system then that is most likely the problem. In my experience on a JV33, any bulk system that has refillable tanks, floats, refillable cartridges, etc IS the air leak and will ultimately cause problems. With the valved ink train and spring loaded dampers the ink train on these, the ink system is very highly tuned to very specific pressures. I've explained it before in prior posts regarding this. The only bulk systems that are truly going to give the least problems are those that are sealed systems using ink bags. What is in a regular cartridge? An ink bag. As ink is used what happens? The bag collapses and pressures in the system remain constant. On a hard tank leading to cartridges with floats or whatever what happens as ink is used? Either the cartridge has to collapse, or a float has to drop some to allow more ink to flow ink, beyond that point something is still opening and changing the pressures. Something has to either collapse or be vented to allow air to displace the ink that was used. With sealed bag type bulk systems like Mimaki's own bulk system, MBIS or Triangles EcoBulk, Bordeaux's BBIS, and a few other brands that have ink bag based bulk systems out now all keep pressures in the ink train just as if it were using cartridges. On the bag type bulk systems the bag simply collapses just as if it were a cartridge. Most also still do offer the older style open tank type bulk systems but they are just not going to work perfect all the time on a JV33. That style did work well on the older JV3 though which was a gravity based ink system. With a bag type bulk ink system the bags collapse as ink is used just like cartridges.
If however it is a bag type bulk system then its hard telling for sure without really being in front of the machine and going over everything with a fine tooth comb.