We also use a Mutoh which buckles the material immediately after loading - in our case, there is a fan that kicks on right after locking the pinch rollers which bubbles the vinyl from underneath. What we do to flatten this out is immediately lift the lever to release the rollers, lift the loose end of the vinyl to let the air escape, then just lock the material in again - takes ten seconds and the fan stays on so the material lays flat the second time around.
If this isn't an issue for you, I would also suggest testing the heat. Our material buckles if the heat is too high.