I'm a little lost as to what is causing the problem with the marks. I was unable to tell if the sheet was loaded as a rear or front set, my plotter simply asks for a roll or a sheet. My prints are a sheet, so they are loaded without asking front or rear?
Sheets are sheets, front and rear do not apply.
I believe my prints from flexi are a bit smaller than they actually are suppose to be. I printed a 5' long logo to be put on top of a drop shadow. The reg marks weren't picked up, so I cut this by hand and installed. The actual printed logo was smaller than the drop shadow that was designed with it. So I'm now not sure if the prints from flexi are too small, or if the plotter needs to be adjusted. Would adjusting the media feed adjustment in the production manager fix this (I'm not sure what this is???)
How much smaller? In both X and Y or just X? [X being the media feed direction] If the difference is large and/or the same in both directions I would suspect that some scale setting somewhere has been diddled. It's not clear where.
On the other hand, have you checked your Output Size Compensation in Production Manager? Select your printer, do Settings->Output Size Compensation...
Here you can do a test print and input the results to adjust the actual output size. Note that this setting can vary from media to media so one size seldom fits all.
Are there adjustments for the plotter to fix where it is looking? For me, when I send a contour cut, I hit send in the production manager, Flexi asks me to align to the firt reg mark, then it takes off looking for the other three. How do I manually set the reg marks?
It's not the plotter that needs adjustment, it's the printer.
As far as using manual marks, it's lengthy to explain but fairly simple to do. Basically you don't use Flexi's contour feature. What you do is create your own set of type 1 or type 2 marks, preferably type 2, and position them at the corners of a known rectangle of known size that bounds your print. Create the rectangle as a wire frame in white.Then you create your contour path in Flexi. You can do this using Flexi's Contour feature then separate the contour so that it's just an ordinary path or you can draw it by hand. Your choice. Either way, make the path white or whatever color is not going to show up on your image. For example, if your contour cutting a full bleed in, say, black, then make the contour path black. Print the image, your contour path, the bounding rectangl, and your registration marks.
Set up your plotter to use type 1 or 2 marks, whatever you chose to use, set the size of the mark to be the same or slightly smaller than the manual marks you created. Load the print into the plotter and use the Auto Register feature of the plotter. The plotter will make a lot od diagonal moves until it finds the first mark. The it will slowly, very slowly, find the other three marks. When it finds the last mark it will pause and disply the X and Y sizes it detected and prompt you to correct these sizes. Correct the sizes so that they are the same size as the bounding rectangle that you used to set the marks in Flexi.
Send just the contour path and the registration marks from Flexi to the Cut/plot dialog. You can also send the bounding rectangle, I do. Make sure that there's 0" margins and you're set to start at the lower left.
The plotter should accurately cut the contour. It will also cut the registration marks and, if you sent it, the bounding rectangle.
The nice thing about this method is if somehow the automatic sensing fails you can select 'Manual' instead of 'Automatic' on the plotter and manually move the carriage to each mark in turn. You'll still get the correction menu after reading the last mark.
This sounds complicated but once you get the hang of it, it's very simple.
Or you can use Flexi's Contour feature and specify manual marks in the Rip and Print. This will print four little bomb sights at each corner. Then you load the print into the plotter and Flexi will prompt you to find each mark in turn. I assume you plotter has the built in light pointer. If so Flexi will enable this pointer for you to locate the marks. If not, you need good eyes and use the blade to locate the center of each bomb sight.